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SUMMARY:Bioinformatics eScience gateway services using the HP-­SEE infras
 tructure
DTSTART;VALUE=DATE-TIME:20120525T100000Z
DTEND;VALUE=DATE-TIME:20120525T101500Z
DTSTAMP;VALUE=DATE-TIME:20261014T181514Z
UID:indico-contribution-231@indico.ipb.ac.rs
DESCRIPTION:Speakers: Akos Balasko (Research assistant)\, Gergely Windisch
  (Obuda University - Hungary)\, Miklos Kozlovszky (OU)\nHP-SEE project is 
 developing and integrating supercomputing centers in the SEE region. This 
 presentation describes online bioinformatics services developed for the re
 gional Life Science virtual organization. With gUSE/WS-PGRADE we have crea
 ted successfully an online Bioinformatics eScience Gateway\, which provide
 s a collection of different type of bioinformatics services for the resear
 chers. The Deep Aligner service is capable to serve short fragment sequenc
 e alignment demand of the regional bioinformatics communities within the S
 EE region. The Disease Gene Mapper service can help researchers to do comp
 arative analysis and target candidate genes for further research of polyge
 ne type diseases. We have implemented bioinformatics workflow built up by 
 data mining and data alignment methods to do comparative gene analysis and
  large scale short fragment sequence alignment tasks. The developed servic
 es are using external online open-access eukaryotic (human\, animal: mouse
 \, rat\, B. rerio\, etc.) databases. Beside the workflows we have implemen
 ted the GUI for the end-users and build up a WS-PGRADE/gUSE based web port
 al to facilitate the research work and opened it as online HP-SEE Bioinfor
 matics eScience Gateway for the regional research communities.\n\nhttps://
 events.saifa.rs/event/303/contributions/231/
LOCATION:Academic Medical Center of the University of Amsterdam L0-­‐22
 3.1 (building L\, ground floor)
URL:https://events.saifa.rs/event/303/contributions/231/
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